Thumpalumpacus
Major
One big issue was that while 1942 era radar could give direction and speed of an enemy formation, it could not give accurate altitude information. While the F4F-4s could be vectored towards an incoming raid, their poor climb rate made interception difficult if the raid was too high, and if the F4Fs were ordered to higher altitudes the time that it took to climb delayed interception.
Lundstrom writes that altitude could be estimated roughly, but that still doesn't alleviate the issue, because it's terribly inefficient. When combined with the F4F's mediocre climb, it resulted in several cases of Japanese attackers getting through.
Lundstrom also notes that American IFF was at times unreliable and that as a result, CAP fighters had to spend time investigating bogeys that were often enough friendlies.