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.....Part of the peacetime mentality.
TO, an excellent book on the PH attack is "Air Raid: Pearl Harbor!" His article is a technical discussion of the inadequancies of the AA batteries and their fire control systems on the USN ships of that day. I have outlined on this forum before how the 5 inch dual purpose batteries were operated during that time frame based on conversations with an uncle who was a CGM on CA25 and was responsible for the 5 inchers on that ship. Taussig"s article verifys my uncle's explanations and reinforces my opinion which is that I wonder how they ever hit an airplane making an attack.
Very similar circumstances between Singapore and PH. The Moorer story goes on. His PatWing was sent to Australia where they were stationed at Darwin. During one of the air raids there he was trying to get his PBY out of the area and was shot down by the Nips. He was wounded but survived. Life was interesting for him in those days. Moorer got on my bad side a while back as I heard him being quoted(after his retirement from the Navy) as saying that civilians in this country had no business owning guns or something to that effect. He may have been misquoted or he may be senile but I crossed him off my list. I am sure that if he knew that he would be distressed. LOL
The "Kates" were notoriously vulnerable to damage. Thats why a 3rd strike at Pearl would not be a cake walk. Just having a barrage means youre going to hit something, and hopefully it would be in the fuel tanks which would doom the aircrew to running out of fuel.
What would be the difference in effective US AA if the Kates were flying high level bombing. not torpedoes? {since the BB's CV's would already have been hit, the third wave would be almost all bombs} vs. tank farm, CA's DD's at dock, repair shops, etc.
Ok after checking, the first wave aircraft in fact began arriving back at the carriers just after 10.00am, as they were recovered they would have been moved to the forward end of the flight deck. Now the aircraft would not have been left there as by the time all aircraft were recovered it was around 11.00. (Sea conditions slowed the recovery process). The decks needed to be cleared for the second wave's arrival. The carriers actually headed toward Oahu to reduce the distance the returning second wave had to cover.
During this time some aircraft would have been stowed below decks on the forward elevators,mainly Zeroes (forward hangar area)and Vals (Middle area)as these were their assigned positions below decks, the Kates however had to be moved to the rear elevators, once all recovery was complete, under normal circumstances. Now the majority of the attack aircraft in the first wave were Kates, so it is possible or probable that they were moved down the middle elevator and pushed to the rear below decks as other aircraft landed above them. (Zeroes and Kates)
The first wave took for the most part an hour just to land all aircraft, without doing anything else but move and stow the planes. So even if you were thinking quick turn around you couldn't do anything because the second wave was just minutes away and it was necessary to get them down asap, tired crews, damaged aircraft, fuel? Recovery of the second wave commenced at around. 11.15 and took approx. an hour to complete.
As for "splitting" up the carriers for different duties, it was possible. But that would not be to IJN doctrine at the time, so the probability of that happening is nil.